PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID SapurV1A.2325s0030.2.p
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Salix
Family NAC
Protein Properties Length: 278aa    MW: 31309.5 Da    PI: 4.0696
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
SapurV1A.2325s0030.2.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM58.72e-181773258
                     NAM  2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekew 58
                            ppGfrFhPtdeelv +yLkkk+ +k++el ++i+e+d+yk++P++Lp  +++++ +++
  SapurV1A.2325s0030.2.p 17 PPGFRFHPTDEELVLYYLKKKICKKRIEL-NIIRELDVYKWDPEELPaGELTTSGQHY 73
                            9****************************.99***************53433322221 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.44E-171273IPR003441NAC domain
PROSITE profilePS5100512.98916176IPR003441NAC domain
PfamPF023655.0E-81758IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    Send to blast
MTVTADSCLG ADDKAWPPGF RFHPTDEELV LYYLKKKICK KRIELNIIRE LDVYKWDPEE  60
LPAGELTTSG QHYNKYTSFN FNQSATSTLQ LHEAPEVTSS PNCEEAPQLN EEDFLEIDDL  120
IGPEPSFFST EQPAENLKFD DFDGLSELDV YDDAAMFFHG MGPVDQEAVS CSYVNSYACD  180
VINQASYQLQ PNTITNLVDY HLQPNLVANQ VDYELQPQFF DSEQMNSQLW VHDHQNNALA  240
TSESHHGILF QSTANQCRAL DEMGGLSGRK AYVNLGL*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_011044815.11e-115PREDICTED: NAC domain-containing protein 69 isoform X2
TrEMBLB9H7Z31e-108B9H7Z3_POPTR; No apical meristem family protein
STRINGPOPTR_0005s22180.11e-108(Populus trichocarpa)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34190.14e-21NAC domain containing protein 17